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Projects

An up to date list of all of my projects can be found on my github page.

General

Academic Research Projects

All of my research so far has dealt with either text mining or network theory. My primary focus right now is a multilabel hierarchical document classification (not listed below). These are all projects I maintain in the Bioinformatics Division at MUSC. * pymur: a Python interface to The Lemur Toolkit. * GOGrapher (manuscript in preparation): GOGrapher is a python library that uses the Gene Ontology to create a network relating terms to each other and proteins to terms. * GOSteiner: A project developing a general measure of protein-group functional coherence, based on the Gene Ontology and utilizing GOGrapher.